STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glvRATP-dependent helicase, DEAD-box. (256 aa)    
Predicted Functional Partners:
malP
Phosphotransferase system (PTS) maltose-specific enzyme IICB component.
 
  
 0.973
glvA
Glycoside Hydrolase,Family 4, GlvA; 6-phospho-alpha-glucosidase.
 
  
 0.961
ywbA
PTS lactose/cellobiose IIC component,PTS system cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.660
treP
Phosphotransferase system (PTS) trehalose-specific enzyme IIBC component.
  
  
 0.640
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
  
  
 0.556
licH
Glycoside Hydrolase Family 4.
 
  
 0.494
liaH
Putative phage shock protein YvqH.
      
 0.487
BL01803
Glycoside Hydrolase Family 4.
 
  
 0.465
yvdJ
Conserved membrane protein YvdJ.
  
  
 0.445
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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