STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03022Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis; Belongs to the glycosyl hydrolase 43 family. (534 aa)    
Predicted Functional Partners:
yteR
Unsaturated rhamnogalacturonyl hydrolase.
     0.911
xynB
Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis,xylan beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.836
BL00713
Glycoside Hydrolase Family 28; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.807
BL00724
Carbohydrate Esterase Family 8 protein.
 
     0.785
BL00567
Carbohydrate Esterase Family 12, putative beta-tubulin.
 
  
  0.778
BL03784
Putative carbohydrate esterase Family 12.
  
  
  0.777
yesT
Putative carbohydrate esterase, Family 12, YesT.
  
  
  0.777
yesY
Carbohydrate esterase, Family 12 YesY.
  
  
  0.773
yesW
Putative polysaccharide lyase family 11 protein.
  
 
  0.734
yesX
Polysaccharide lyase Family 11.
  
 
  0.731
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.