STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03022Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis; Belongs to the glycosyl hydrolase 43 family. (534 aa)    
Predicted Functional Partners:
yteR
Unsaturated rhamnogalacturonyl hydrolase.
     0.911
yxiA
Glycoside hydrolase, family 43 YxiA; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.850
BL00713
Glycoside Hydrolase Family 28; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.839
xynB
Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis,xylan beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
    
0.835
BL00724
Carbohydrate Esterase Family 8 protein.
 
   
 0.791
yesW
Putative polysaccharide lyase family 11 protein.
  
  
 0.774
BL00567
Carbohydrate Esterase Family 12, putative beta-tubulin.
 
     0.765
BL03784
Putative carbohydrate esterase Family 12.
  
     0.764
yesT
Putative carbohydrate esterase, Family 12, YesT.
  
     0.764
yesY
Carbohydrate esterase, Family 12 YesY.
  
     0.760
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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