STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xynBGlycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis,xylan beta-1,4-xylosidase; Belongs to the glycosyl hydrolase 43 family. (515 aa)    
Predicted Functional Partners:
BL03022
Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis; Belongs to the glycosyl hydrolase 43 family.
 
    
0.836
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.764
abfA
Glycoside Hydrolase Family 51.
 
 
 0.742
BL02653
Glycoside Hydrolase Family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.673
celC
Glycoside Hydrolase Family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.671
BL02680
Putative Glycoside Hydrolase Family 3.
 
  
 0.670
BL00724
Carbohydrate Esterase Family 8 protein.
 
     0.668
yvfO
Glyccosyl Hydrolase Family 53; Hydrolyzes the beta-1,4-galactan linkages of arabinogalactan type I, a pectic substance found in plants such as soybeans.
  
  
 0.649
yxiA
Glycoside hydrolase, family 43 YxiA; Belongs to the glycosyl hydrolase 43 family.
  
     0.639
cel12A
Glycoside Hydrolase Family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 
  0.613
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.