STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03025NAD(P)H dehydrogenase (quinone). (197 aa)    
Predicted Functional Partners:
BL02638
Trp repressor binding protein, putative; Belongs to the WrbA family.
     
 0.903
yhcB
Putative Flavodoxin/nitric oxide synthase YhcB.
     
 0.903
menH
Methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
BL07000
Hypothetical protein.
    
  0.900
BL03026
Hypothetical protein, putative hydrolase.
       0.779
ywrO
NAD(P)H dehydrogenase YwrO.
  
     0.583
yrkL
Putative NAD(P)H oxidoreductase.
  
     0.534
BL03024
Putative extracellular solute-binding protein, family 1.
       0.445
BL01716
NAD(P)H dehydrogenase.
  
     0.416
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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