STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
treRTranscriptional regulator (GntR family). (238 aa)    
Predicted Functional Partners:
treP
Phosphotransferase system (PTS) trehalose-specific enzyme IIBC component.
 
  
 0.910
treA
Glycoside Hydrolase Family 13.
 
  
 0.864
BL03053
Probable transcriptional regulator (AraC/XylS family).
  
  
 0.646
sacX
Negative regulatory protein of SacY.
 
  
 0.611
sacP
Phosphotransferase system (PTS) sucrose-specific enzyme IIBC component.
 
  
 0.609
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 
 0.585
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 
 0.556
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 
 0.532
BL03071
Putative transferase hexapeptide repeat containing protein.
       0.520
ybbF
Phosphotransferase system PTS, EIIB domain,Phosphotransferase system, EIIC; Probable PTS sucrose-specific enzyme IIBC component.
 
  
 0.485
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.