STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03074TPR-like, putative glycosyl transferase family 2 protein. (360 aa)    
Predicted Functional Partners:
lanT
Lantibiotic transport protein.
  
  
 0.740
BL03076
Putative Oxidoreductase.
 
     0.665
spsC
Spore coat biosynthesis protein; BL03075 similar to spsC from Bacillus subtilis; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.608
cheA
Two-component sensor histidine kinase CheA.
   
    0.570
BL03073
Hypothetical protein.
 
    0.561
yjbJ
Putative Glycoside Hydrolase Family 23, YjbJ.
  
    0.471
BL03072
Hypothetical protein.
 
     0.464
BL03077
UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.461
BL01681
glutamyl-tRNA(Gln) amidotransferase (subunit A); Similar to gatA from Bacillus subtilis; Belongs to the amidase family.
  
 
  0.457
ylxG
Flagellar hook capping protein.
   
    0.439
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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