STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsCSpore coat biosynthesis protein; BL03075 similar to spsC from Bacillus subtilis; Belongs to the DegT/DnrJ/EryC1 family. (369 aa)    
Predicted Functional Partners:
BL03076
Putative Oxidoreductase.
 
 
  0.967
BL03077
UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.908
BL00696
Polysaccharide biosynthesis protein.
 
 
 0.882
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
 
 0.854
BL03071
Putative transferase hexapeptide repeat containing protein.
 
  0.848
yvfD
Acetyltransferase, possible polysaccharide biosynthesis protein YvfD.
 
 
 0.773
ntdC
Putative oxidoreductase.
 
 
  0.667
BL03074
TPR-like, putative glycosyl transferase family 2 protein.
 
    0.608
mnaA
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.599
yisS
Putative oxidoreductase.
 
 
  0.591
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.