STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfkJProtein-tyrosine phosphatase YfkJ; Low molecular weight phosphotyrosine protein phosphatase. (157 aa)    
Predicted Functional Partners:
yfkI
YfkI.
  
    0.933
yfkH
Possible RNase; Belongs to the UPF0761 family.
  
  
 0.882
ywlE
Low molecular weight phosphotyrosine protein phosphatase.
  
  
  0.814
yrkH
Conserved protein YrkH.
  
   0.783
BL02060
Metallo-beta-lactamase/rhodanese-like domain protein.
  
   0.783
yitJ
Homocysteine S-methyltransferase.
    
  0.726
maf
Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      0.694
ywqE
Protein tyrosine phoshpatase.
     
 0.620
ytxJ
YtxJ.
  
 
 0.611
dhbF
DhbF.
  
 
 0.533
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.