STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yflLAcylphosphatase YflL. (90 aa)    
Predicted Functional Partners:
pta
Phosphotransacetylase.
    
 0.939
ydaP
Pyruvate decarboxylase; Belongs to the TPP enzyme family.
     
 0.931
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.914
BL01681
glutamyl-tRNA(Gln) amidotransferase (subunit A); Similar to gatA from Bacillus subtilis; Belongs to the amidase family.
    
  0.906
acsA
acetyl-CoA synthetase.
     
  0.900
ytcI
AMP-dependent synthetase and ligase YtcI.
     
  0.900
dhaS
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
BL01993
acetyl-CoA synthetase.
     
  0.900
ywdH
Aldehyde dehydrogenase,Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
yflK
Conserved hypothetical protein with MOSC domain YflK.
       0.549
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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