STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yflLAcylphosphatase YflL. (90 aa)    
Predicted Functional Partners:
BL00199
Alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.869
ykoU
ATP-dependent DNA ligase.
  
  
  0.762
pta
Phosphotransacetylase.
    
 0.709
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.618
BL01681
glutamyl-tRNA(Gln) amidotransferase (subunit A); Similar to gatA from Bacillus subtilis; Belongs to the amidase family.
    
  0.576
ptb
Phosphate butyryltransferase.
    
 0.569
yflK
Conserved hypothetical protein with MOSC domain YflK.
       0.551
dhaS
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.545
yfmT
Aldehyde dehydrogenase YfmT; Belongs to the aldehyde dehydrogenase family.
     
 0.545
ywdH
Aldehyde dehydrogenase,Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.545
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.