STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03104Spore coat biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)    
Predicted Functional Partners:
BL00696
Polysaccharide biosynthesis protein.
 
 
 0.899
BL03105
Putative transferase hexapeptide repeat containing protein.
 
 
  0.877
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
 
 0.873
BL03106
NAD-dependent epimerase/dehydratase.
 
 
  0.862
yvfD
Acetyltransferase, possible polysaccharide biosynthesis protein YvfD.
 
 
 0.803
BL03071
Putative transferase hexapeptide repeat containing protein.
 
  0.802
BL03077
UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.773
BL03076
Putative Oxidoreductase.
 
 
  0.753
BL03107
Putative transferase, conserved hypothetical protein.
 
 
  0.677
ntdC
Putative oxidoreductase.
 
 
  0.615
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.