STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhbHPutative stress response protein YhbH; Belongs to the UPF0229 family. (388 aa)    
Predicted Functional Partners:
prkA
Serine protein kinase.
 
  
 0.993
spoVR
Stage V sporulation protein R, spoVR.
 
  
 0.985
yhbB
Conserved hypothetical protein yhbB.
 
    0.561
ylaK
Nucleotide binding protein.
   
    0.540
ymfJ
Hypothetical protein.
  
     0.494
cotE
Morphogenic protein.
  
    0.414
yhcB
Putative Flavodoxin/nitric oxide synthase YhcB.
  
    0.407
yhbJ-2
Putative transporter YhbJ.
       0.404
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.