STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03210Conserved hypothetical protein. (100 aa)    
Predicted Functional Partners:
BL03211
GCN5-related N-acetyltransferase.
 
     0.809
ysdB
Conserved protein YsdB.
  
     0.694
ywgA
YwgA.
  
     0.515
ykyA
Putative transcription factor,conserved hypothetical.
  
     0.510
yizA
Hypothetical protein.
  
     0.505
ywpF
Conserved protein YwpF.
  
     0.491
BL03212
Conservd hypothetical protein.
       0.491
yolD
Putative phage related protein.
  
     0.484
yxlE
YxlE.
  
     0.475
BL07035
Hypothetical protein; BLi02070.
  
     0.473
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.