STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytlDPutative sulfonate transport system permease protein YtlD. (272 aa)    
Predicted Functional Partners:
ytlC
Putative sulfonate transport system ATP-binding protein YtlC.
 
 
 0.993
ytlA
Putative sulfonate transport system substrate-binding protein YtlA.
 
 
 0.987
ssuA
Aliphatic sulfonate ABC transporter (binding lipoprotein).
 
 
 0.941
ssuB
Aliphatic sulfonate ABC transporter (binding protein); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.934
ssuD
Aliphatic sulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.758
BL03289
Peptidase S9, serine active site.
       0.588
azr
Putative NADPH-dependent FMN reductase YhdA.
  
 
  0.560
BL03290
Hypothetical protein.
       0.549
ssuC
Aliphatic sulfonate ABC transporter (permease).
  
  
 
0.541
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.463
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.