Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| degVA | ilvA | BL03303 | BL03302 | DegVA. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.438 |
| degVA | rex | BL03303 | BL00847 | DegVA. | Redox regulator Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.426 |
| degVA | yloU | BL03303 | BL02307 | DegVA. | Highly conserved hypothetical protein YloU. | 0.564 |
| degVA | yloV | BL03303 | BL02308 | DegVA. | Glycerone kinase protein. | 0.987 |
| degVA | yplQ | BL03303 | BL03308 | DegVA. | Putative membrane protein, Hemolysin III homolog. | 0.450 |
| degVA | ypmP | BL03303 | BL05223 | DegVA. | Conserved protein YpmP. | 0.548 |
| degVA | ypmQ | BL03303 | BL03304 | DegVA. | Conserved hypothetical YpmQ; Biological Process: electron transport. | 0.767 |
| degVA | ypmR | BL03303 | BL03305 | DegVA. | Conserved protein YpmR. | 0.533 |
| degVA | ypmS | BL03303 | BL03306 | DegVA. | Conserved protein YpmS. | 0.563 |
| degVA | ypmT | BL03303 | BL05222 | DegVA. | YpmT. | 0.407 |
| ilvA | degVA | BL03302 | BL03303 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | DegVA. | 0.438 |
| ilvA | yplQ | BL03302 | BL03308 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Putative membrane protein, Hemolysin III homolog. | 0.516 |
| ilvA | ypmP | BL03302 | BL05223 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Conserved protein YpmP. | 0.608 |
| rex | degVA | BL00847 | BL03303 | Redox regulator Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | DegVA. | 0.426 |
| yloU | degVA | BL02307 | BL03303 | Highly conserved hypothetical protein YloU. | DegVA. | 0.564 |
| yloU | yloV | BL02307 | BL02308 | Highly conserved hypothetical protein YloU. | Glycerone kinase protein. | 0.983 |
| yloV | degVA | BL02308 | BL03303 | Glycerone kinase protein. | DegVA. | 0.987 |
| yloV | yloU | BL02308 | BL02307 | Glycerone kinase protein. | Highly conserved hypothetical protein YloU. | 0.983 |
| yplQ | degVA | BL03308 | BL03303 | Putative membrane protein, Hemolysin III homolog. | DegVA. | 0.450 |
| yplQ | ilvA | BL03308 | BL03302 | Putative membrane protein, Hemolysin III homolog. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.516 |
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