STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03310Hypothetical protein. (234 aa)    
Predicted Functional Partners:
cheV
CheV.
     
 0.799
ribA
GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.796
BL03174
Two-component sensor histidine kinase.
    
 0.785
BL03882
Hypothetical protein.
   
 
 0.756
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
  0.733
prpC
Protein phosphatase.
  
 0.693
ypnP
Putative Multi antimicrobial extrusion protein.
       0.553
manP
Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component.
  
   0.432
fruA
Phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
  
   0.432
yhcK
GGDEF-domain containing protein.
    
  0.431
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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