STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjaZConserved hypothetical protein YjaZ. (262 aa)    
Predicted Functional Partners:
ylxL
Conserved hypothetical protein.
  
     0.748
ylbE
Hypothetical protein.
  
     0.736
yodI
Hypothetical protein.
 
     0.727
ylbD
Hypothetical protein.
  
     0.682
ytzH
YtzH.
  
     0.675
ytrI
Conserved protein YtrI.
  
     0.672
spoVIF
SpoVIF.
  
     0.663
yjbA
Conserved protein YjbA; Belongs to the UPF0736 family.
 
     0.661
fliJ
Flagellar protein.
  
     0.659
yqfQ
Tubulin YqfQ.
  
     0.657
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.