STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yjbCGCN5-related N-acetyltransferase. (192 aa)    
Predicted Functional Partners:
spx
Glutaredoxin family protein Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.
  
  
 0.703
ytxH
Conserved protein YtxH.
  
  
 0.689
ykyA
Putative transcription factor,conserved hypothetical.
 
     0.684
ybyB
Conserved hypothetical protein YbyB.
  
     0.652
yrvD
Conserved protein YrvD.
  
     0.591
yhaK
Hypothetical protein.
  
     0.564
atpI
ATP synthase (subunit i).
  
     0.552
BL00159
Putative lytic transglycosylase YomI.
  
     0.538
BL03084
Putative stress response protein; OsmC-like protein.
 
     0.537
oppF
Oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
       0.531
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.