STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbCGCN5-related N-acetyltransferase. (192 aa)    
Predicted Functional Partners:
ydaG
FMN-binding split barrel domain protein YdaG.
  
    0.750
ytxH
Conserved protein YtxH.
  
  
 0.745
ykyA
Putative transcription factor,conserved hypothetical.
 
     0.684
ydaT
Conserved protein YdaT.
  
    0.682
yfhF
Conserved hypothetical protein, YfcH; NAD dependent epimerase/dehydratase family.
  
    0.681
ybyB
Conserved hypothetical protein YbyB.
  
     0.652
yheG
Conserved hypothetical protein.
   
    0.645
ywnB
YwnB.
   
    0.645
spx
Glutaredoxin family protein Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.
  
  
 0.639
yugJ
Iron-containing alcohol dehydrogenase YugJ.
   
  
 0.632
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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