STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03332Conserved hypothetical protein. (338 aa)    
Predicted Functional Partners:
BL03335
Conserved hypothetical protein.
 
  
 0.971
BL03334
Conserved hypothetical protein.
 
     0.870
citS
Two-component sensor histidine kinase.
 
    0.784
citT
Two-component response regulator.
 
    0.753
BL03342
Two-component sensor kinase.
 
    0.733
malK
Putative Histidine kinase.
 
    0.688
BL03341
Two-component response regulator.
 
    0.683
BL01965
Conserved hypothetical protein.
  
     0.620
BL01967
Conserved hyopothetical protein.
  
   
 0.620
malR
Hypothetical conserved protein.
 
    0.610
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.