STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbITruncated form of bacterial hemoglobin YjbI. (132 aa)    
Predicted Functional Partners:
yjbH
Conserved protein YjbH; Belongs to the UPF0413 family.
  
  
 0.960
hmp
Flavohemoglobin; Belongs to the globin family.
  
  
 0.580
cheA
Two-component sensor histidine kinase CheA.
    
  0.550
yjbJ
Putative Glycoside Hydrolase Family 23, YjbJ.
       0.490
yjbK
Conserved protein YjbK.
       0.483
ywbO
DSBA oxidoreductase YwbO; Conserved protein B.clausii gene name: FrnE.
  
  
 0.456
yjbO
Pseudouridine synthase YjbO; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
   
   0.428
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.