STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lytBModifier protein of major autolysin LytC (CWBP76). (714 aa)    
Predicted Functional Partners:
BL03297
Membrane bound lipoprotein.
  
  
 0.961
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
 
  
0.909
dnaI
Helicase loader.
   
    0.760
ywtF
Cell envelope-related transcriptional attenuator YwtF.
     
 0.587
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
  
 0.514
cwlS
gamma-D-glutamate-meso-diaminopimelate muropeptidase (major autolysin) (CWBP49').
  
  
 0.503
spoIVA
Sporulation Stage IV protein A SpoIVA; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.494
yocH
Putative peptidogycan hydrolase YocH.
 
  
 0.489
tuaE
TuaE.
 
     0.487
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.475
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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