STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytBModifier protein of major autolysin LytC (CWBP76). (714 aa)    
Predicted Functional Partners:
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
 
 
0.961
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
 0.887
BL03297
Membrane bound lipoprotein.
  
  
 0.863
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
 
 0.859
cwlD
N-acetylmuramoyl-L-alanine amidase.
 
 0.826
BL02879
N-acetylmuramoyl-L-alanine amidase.
 
 0.815
BL01514
Cell wall hydrolase/autolysin.
 
 0.810
BL01663
Antibacterial protein.
  
 
 0.755
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.740
dnaI
Helicase loader.
   
    0.729
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.