STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lytCN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49). (495 aa)    
Predicted Functional Partners:
lytB
Modifier protein of major autolysin LytC (CWBP76).
 
  
0.909
BL03297
Membrane bound lipoprotein.
  
  
 0.672
lytE
Cell wall hydrolase phosphatase-associated protein.
 
  
 0.651
lytD
N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 73.
  
  
 0.638
bprA
Bacillopeptidase F.
 
    0.629
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
 
0.528
murAA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.495
lytR
Membrane-bound protein; May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).
     
 0.475
yttA
YttA.
   
   0.472
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
 
   
0.470
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (26%) [HD]