STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
degUTwo-component response regulator. (229 aa)    
Predicted Functional Partners:
degS
Two-component sensor histidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.
 
 0.993
rapG
Response regulator aspartate phosphatase.
    
  0.913
yhcY
ATP-binding region protein.
 
 
 0.898
BL03900
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.876
desK
Two-component sensor histidine kinase esponsible for cold induction of the des gene.
 
 
 0.865
BL02057
Two-component sensor histidine kinase.
 
 
 0.857
liaS
Two-component sensor histidine kinase LiaS.
 
 0.846
ydfH
Histidine kinase YdfH.
  
   0.843
degV
DegV.
       0.664
yvyE
YvyE.
       0.568
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.