STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comFCCompetence protein. (244 aa)    
Predicted Functional Partners:
comFB
Competence protein.
  
  
 0.962
comFA
Late competence protein.
 
  
 0.888
comEC
ComEC.
 
  
 0.882
smf
DNA processing Smf protein homolog.
 
 
 0.873
radC
DNA repair protein; Belongs to the UPF0758 family.
  
    0.773
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.748
tyrA
Prephenate dehydrogenase.
   
  
 0.747
ylxF
Protein kinase PKN/PRK1, effector,Flagellar motor switch protein FliG-like.
   
    0.737
nagA
N-acetylglucosamine-6-phosphate deacetylase (Carbohydrate esterase Family 9).
  
    0.710
hemY
Protoporphyrinogen IX and coproporphyrinogen III oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
    0.690
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.