STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvyDYvyD; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (187 aa)    
Predicted Functional Partners:
rpmC
Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
 
 
 0.975
rpsF
Ribosomal protein S6 (BS9); Binds together with S18 to 16S ribosomal RNA.
  
 
   0.970
rpsU
Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.968
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.964
rpmA
Ribosomal protein L27 (BL24); Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.963
rpmH
Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.963
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.962
rpsE
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.962
rpsP
Ribosomal protein S16 (BS17); Belongs to the bacterial ribosomal protein bS16 family.
    
 
 0.962
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
  
   0.961
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.