STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctpBPeptidase S41A, C-terminal protease; Belongs to the peptidase S41A family. (479 aa)    
Predicted Functional Partners:
yocH
Putative peptidogycan hydrolase YocH.
 
 
 0.842
ypiA
TPR-repeat containing conserved hypothetical protein.
  
 
 0.826
cwlO
Putative peptidoglycan hydrolase, DL-endopeptidase II family; Shows a cell wall hydrolytic DL-endopeptidase activity. Belongs to the peptidase C40 family.
   
 
 0.789
cwlS
gamma-D-glutamate-meso-diaminopimelate muropeptidase (major autolysin) (CWBP49').
  
 
 0.704
lytE
Cell wall hydrolase phosphatase-associated protein.
  
 
 0.704
ftsX
Cell-division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
   
 0.699
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
  
  
 0.693
BL03388
Conserved hypothetical protein.
 
 
 
 0.680
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.670
spoIVFA
SpoIVFA.
  
 
 
 0.584
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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