STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvlCPspC. (66 aa)    
Predicted Functional Partners:
yvlB
Conserved hypothetical protein YvlB.
  
  
 0.959
yvlD
Conserved membrane protein YvlD.
  
    0.955
pspA
Phage shock protein A homolog.
  
 
 0.951
liaH
Putative phage shock protein YvqH.
  
 
 0.948
yvlA
YvlA.
  
    0.857
BL03174
Two-component sensor histidine kinase.
   
 
 0.812
yvnB
YvnB.
       0.586
liaG
Conserved protein LiaG.
  
  
 0.539
liaS
Two-component sensor histidine kinase LiaS.
  
  
 0.499
yhcY
ATP-binding region protein.
  
    0.496
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.