STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03429Putative transcriptional regulator. (572 aa)    
Predicted Functional Partners:
BL03174
Two-component sensor histidine kinase.
  
  
 0.822
BL03434
Putative 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
 
     0.808
cheV
CheV.
  
 
 0.776
sigL
RNA polymerase sigma-54 factor (sigma-L).
 
  
 0.775
yhcY
ATP-binding region protein.
     
 0.741
BL03433
Conserved hypothetical protein.
 
     0.739
yclK
Two-component sensor histidine kinase YclK.
    
  0.736
BL03428
Hypothetical protein.
       0.528
BL03432
Putative alcohol dehydrogenase.
  
    0.492
BL03431
Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.482
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.