STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03432Putative alcohol dehydrogenase. (388 aa)    
Predicted Functional Partners:
adhA
NADP-dependent alcohol dehydrogenase.
  
 0.874
yusL
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase YusL.
  
 0.827
gltA
Glutamate synthase (large subunit).
   
 
 0.818
BL03433
Conserved hypothetical protein.
       0.784
BL03434
Putative 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.784
BL03431
Putative dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
    0.770
BL01863
Putative formate C-acetyltransferase.
 
 
 0.720
BL03435
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
   
   0.707
BL00199
Alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
0.658
glgA
Starch synthase, glycosyl transferase family 5; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.639
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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