STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yveKPutative capsular polysaccharide biosynthesis protein YveK. (250 aa)    
Predicted Functional Partners:
yveL
Putative capsular polysaccharide biosynthesis protein YveL.
 
 0.991
ywqE
Protein tyrosine phoshpatase.
 
 
 0.926
yvfC
Putative sugar transferase YvfC.
 
  
 0.862
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
  
 0.844
yveP
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 4, YveP.
 
    0.775
yveO
Putative exopolysaccharide biosynthesis protein, Glycosyl Transferase Family 2,YveO.
  
  
 0.756
yveR
Polysaccharide biosynthesis protein, Glycosyl transferase Family 2,YveR.
  
  
 0.720
yveN
Putative capsular polysaccharide biosynthesis protein,Glycosyl transferase Family 4, YveN.
  
    0.718
yvfF
Polysaccharide pyruvyl transferase YvfF.
 
  
 0.713
yveS
Putative Polysaccharide pyruvyl transferase YveS.
 
    0.709
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.