STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yvfCPutative sugar transferase YvfC. (200 aa)    
Predicted Functional Partners:
yvfD
Acetyltransferase, possible polysaccharide biosynthesis protein YvfD.
  
 0.998
yvfE
Putative polysaccharide biosynthesis protein YvfE; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.994
yveP
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 4, YveP.
 
  
 0.990
yveR
Polysaccharide biosynthesis protein, Glycosyl transferase Family 2,YveR.
 
  
 0.979
yveS
Putative Polysaccharide pyruvyl transferase YveS.
  
    0.964
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
  
 0.957
BL03448
YvfB.
  
  
 0.949
yvfF
Polysaccharide pyruvyl transferase YvfF.
  
    0.948
yveL
Putative capsular polysaccharide biosynthesis protein YveL.
 
  
 0.942
yveQ
Putative capsular polysaccharide biosynthesis protein YveQ.
 
  
 0.932
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.