STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvfFPolysaccharide pyruvyl transferase YvfF. (325 aa)    
Predicted Functional Partners:
yvfE
Putative polysaccharide biosynthesis protein YvfE; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.950
yvfC
Putative sugar transferase YvfC.
  
    0.903
yveS
Putative Polysaccharide pyruvyl transferase YveS.
 
   
0.893
yveR
Polysaccharide biosynthesis protein, Glycosyl transferase Family 2,YveR.
  
  
 0.877
BL03448
YvfB.
 
    0.877
yvfD
Acetyltransferase, possible polysaccharide biosynthesis protein YvfD.
  
  
 0.862
yveQ
Putative capsular polysaccharide biosynthesis protein YveQ.
 
    0.838
yveO
Putative exopolysaccharide biosynthesis protein, Glycosyl Transferase Family 2,YveO.
  
  
 0.775
yveP
Putative capsular polysaccharide biosynthesis protein,Glycosyl Transferase Family 4, YveP.
  
    0.763
yveN
Putative capsular polysaccharide biosynthesis protein,Glycosyl transferase Family 4, YveN.
  
    0.746
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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