Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ackA | pta | BL00419 | BL03905 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphotransacetylase. | 0.994 |
| ackA | ptb | BL00419 | BL01500 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate butyryltransferase. | 0.983 |
| ackA | yvbY | BL00419 | BL03458 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.690 |
| lctP | ysfD | BL01704 | BL01798 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 4Fe-4S ferredoxin, iron-sulfur binding domain; glcF in Bacillus thuringiensis. | 0.521 |
| lctP | yvbY | BL01704 | BL03458 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.478 |
| lctP | yvfI | BL01704 | BL03455 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Probable transcriptional regulator YvfI. | 0.400 |
| lctP | yvfV | BL01704 | BL03456 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | YvfV; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.539 |
| lctP | yvfW | BL01704 | BL03457 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Iron-sulfur cluster binding protein YvfW; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.758 |
| lctP | ywjF | BL01704 | BL03924 | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 4Fe-4S ferredoxin protein. | 0.438 |
| pta | ackA | BL03905 | BL00419 | Phosphotransacetylase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.994 |
| pta | yvbY | BL03905 | BL03458 | Phosphotransacetylase. | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.543 |
| pta | yvfW | BL03905 | BL03457 | Phosphotransacetylase. | Iron-sulfur cluster binding protein YvfW; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.588 |
| ptb | ackA | BL01500 | BL00419 | Phosphate butyryltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.983 |
| ptb | yvbY | BL01500 | BL03458 | Phosphate butyryltransferase. | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.543 |
| ptb | yvfW | BL01500 | BL03457 | Phosphate butyryltransferase. | Iron-sulfur cluster binding protein YvfW; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.588 |
| ysfD | lctP | BL01798 | BL01704 | 4Fe-4S ferredoxin, iron-sulfur binding domain; glcF in Bacillus thuringiensis. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.521 |
| ysfD | yvbY | BL01798 | BL03458 | 4Fe-4S ferredoxin, iron-sulfur binding domain; glcF in Bacillus thuringiensis. | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | 0.924 |
| ysfD | yvfH | BL01798 | BL03613 | 4Fe-4S ferredoxin, iron-sulfur binding domain; glcF in Bacillus thuringiensis. | Putative L-lactate permease YvfH; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.531 |
| ysfD | yvfW | BL01798 | BL03457 | 4Fe-4S ferredoxin, iron-sulfur binding domain; glcF in Bacillus thuringiensis. | Iron-sulfur cluster binding protein YvfW; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate. | 0.944 |
| yvbY | ackA | BL03458 | BL00419 | YvbY; Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.690 |
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