Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03502Hypothetical phagelike protein. (436 aa)    
Predicted Functional Partners:
BL03500
Phage terminase like, small subunit protein.
 
  
 0.963
BL03501
Hypothetical protein.
 
   
 0.949
BL03504
Hypothetical phagelike protein.
 
 
 
 0.947
BL03503
ATP-dependent protease proteolytic subunit (class III heat-shock protein); Belongs to the peptidase S14 family.
 
    0.929
BL05345
Putative electron transporter.
 
  
 0.899
BL03507
Hypothetical phagelike protein.
 
   0.891
BL05138
Phage related protein.
 
   0.809
BL03510
Putative phagelike major tail protein.
 
   
 0.805
BL00882
Phage related, putative terminase large sub-unit.
 
   
 0.797
BL00875
Phage related protein.
 
   
 0.786
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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