Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03505Hypothetical phagelike protein. (141 aa)    
Predicted Functional Partners:
BL03506
Hypothetical phagelike protein.
       0.718
BL03507
Hypothetical phagelike protein.
       0.718
BL03508
Hypothetical phage like protein.
       0.718
BL03509
Hypothetical protein.
       0.718
BL03504
Hypothetical phagelike protein.
       0.709
BL03510
Putative phagelike major tail protein.
       0.694
BL02849
Conserved hypothetical protein; Putative thioesterase.
  
     0.608
BL03502
Hypothetical phagelike protein.
       0.597
BL03503
ATP-dependent protease proteolytic subunit (class III heat-shock protein); Belongs to the peptidase S14 family.
       0.597
BL05344
Hypothetical phagelike protein.
       0.597
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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