STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03524Glycoside Hydrolase Family 25. (317 aa)    
Predicted Functional Partners:
BL00969
Phage related protein.
 
     0.748
BL00967
Phage related protein.
     
 0.722
xhlB
Holin.
       0.620
xhlA
XhlA.
       0.589
BL03512
Hypothetical phage tail like protein.
 
     0.551
BL00968
Hypothetical protein.
       0.505
cwlO
Putative peptidoglycan hydrolase, DL-endopeptidase II family; Shows a cell wall hydrolytic DL-endopeptidase activity. Belongs to the peptidase C40 family.
  
  
 0.491
BL03515
Glycoside Hydrolase Family 73.
     
 0.464
BL07026
Hypothetical protein; BLi01483.
       0.455
BL05130
Hypothetical protein.
       0.426
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.