STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03524Glycoside Hydrolase Family 25. (317 aa)    
Predicted Functional Partners:
cinA
Competence-damage inducible protein; Belongs to the CinA family.
   
 
 0.812
yhcR
Nucleic acid-binding hydrolase YhcR.
    
 0.781
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.773
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
    
 0.759
guaB
Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.719
BL00969
Phage related protein.
 
     0.634
yerB
Conserved protein YerB.
    
 0.622
ywoF
Polysaccharide Lyase Family 9,YwoF.
    
 0.622
BL03072
Hypothetical protein.
    
 0.622
yuaB
Conserved hypothetical protein yuaB.
    
 0.622
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.