STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykvIAmino acid/polyamine transporter II. (344 aa)    
Predicted Functional Partners:
spoIIM
SpoIIM; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
    0.717
spoIIIAE
SpoIIIAE.
  
    0.699
spoIIIAB
SpoIIIAB.
  
    0.649
yyaC
Conserved hypothetical protein containing domain DUF1256.
 
    0.621
lonB
Lon-like ATP-dependent protease.
  
     0.603
yqfC
Conserved hypothetical protein YqfC.
  
     0.597
spoIIIAD
SpoIIIAD.
  
    0.559
ytxC
Conserved protein YtxC.
  
     0.533
spoIIIAC
SpoIIIAC.
  
    0.529
clpE
ATP-dependent Clp protease-like (class III stress gene) ClpE; Belongs to the ClpA/ClpB family.
       0.515
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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