STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yxaIConserved hypothetical protein. (174 aa)    
Predicted Functional Partners:
yczC
Conserved membrane protein YczC.
  
   
 0.793
yteJ
Conserved membrane protein YteJ.
  
   
 0.791
yxiO
MFS Sugar transporter superfamily protein.
       0.584
yxaJ
Hypothetical protein.
      
 0.560
yabO
Putative RNA-binding S4 protein YabO.
   
    0.556
cheV
CheV.
   
   0.539
BL03648
Hypothetical protein.
       0.518
sppA
Signal peptide peptidase.
 
  
 0.452
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.429
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.