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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykuJYkuJ. (80 aa)    
Predicted Functional Partners:
ykuK
Hypothetical protein.
  
    0.726
ylbG
Conserved hypothetical protein.
  
     0.595
yneA
Peptidoglycan-binding protein YneA; Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and/or DivIC to the division machinery; Belongs to the YneA family.
  
     0.572
yheA
Conserved hypothetical protein YheA; Belongs to the UPF0342 family.
   
    0.550
BL02742
Hypothetical protein.
  
     0.514
yqgW
Conserved protein YqgW.
  
     0.499
ybcL
Probable transporter; Major facilitator superfamily.
      
 0.468
yrvD
Conserved protein YrvD.
  
     0.460
ytmP
YtmP.
  
     0.456
yaaN
Putative Toxic anion resistance protein YaaN; Belongs to the TelA family.
  
     0.444
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.