STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03690Hypothetical protein. (169 aa)    
Predicted Functional Partners:
BL03691
Hypothetical protein.
       0.576
ytpP
Putative thioredoxin YtpP.
   
 0.537
ykuV
Thioredoxin domain protein YkuV.
   
 0.537
yusE
YusE.
   
 0.537
slp
Small peptidoglycan-associated lipoprotein.
   
  0.522
msrB
Conserved protein MsrB.
  
 
 0.498
gltA
Glutamate synthase (large subunit).
     
 0.460
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 
 0.459
BL03688
Hypothetical protein.
       0.429
BL03692
Hypothetical protein.
       0.426
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.