STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03701ABC transporter. (258 aa)    
Predicted Functional Partners:
BL03702
Transcriptional regulator.
 
 0.999
ycdH
Periplasmic solute binding protein.
 
 
 0.995
mntD
Manganese ABC transporter.
 
 
 0.983
mntA
Manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.939
zur
Transcriptional regulator; Belongs to the Fur family.
  
  
 0.926
appD
Oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
 
     
0.565
BL03723
Hypothetical protein.
       0.560
yqfU
Conserved hypothetical protein YqfU.
       0.530
appDA
ABC transporter (ATP-binding protein).
 
    
0.430
birA
Transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
    0.418
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.