Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL03701 | BL03702 | BL03701 | BL03702 | ABC transporter. | Transcriptional regulator. | 0.999 |
| BL03701 | yqfU | BL03701 | BL03700 | ABC transporter. | Conserved hypothetical protein YqfU. | 0.518 |
| BL03701 | zur | BL03701 | BL03703 | ABC transporter. | Transcriptional regulator; Belongs to the Fur family. | 0.883 |
| BL03702 | BL03701 | BL03702 | BL03701 | Transcriptional regulator. | ABC transporter. | 0.999 |
| BL03702 | yqfU | BL03702 | BL03700 | Transcriptional regulator. | Conserved hypothetical protein YqfU. | 0.521 |
| BL03702 | zur | BL03702 | BL03703 | Transcriptional regulator. | Transcriptional regulator; Belongs to the Fur family. | 0.870 |
| BL05386 | zur | BL05386 | BL03703 | Transcriptional repressor. | Transcriptional regulator; Belongs to the Fur family. | 0.589 |
| gltA | rpoB | BL01971 | BL02798 | Glutamate synthase (large subunit). | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.427 |
| gltA | rpoC | BL01971 | BL02626 | Glutamate synthase (large subunit). | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.480 |
| gltA | zur | BL01971 | BL03703 | Glutamate synthase (large subunit). | Transcriptional regulator; Belongs to the Fur family. | 0.861 |
| katA | zur | BL00951 | BL03703 | Vegetative catalase 1; Belongs to the catalase family. | Transcriptional regulator; Belongs to the Fur family. | 0.485 |
| rpoA | rpoB | BL01025 | BL02798 | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | BL01025 | BL02626 | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | sigA | BL01025 | BL03682 | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase major sigma-43 factor (sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.982 |
| rpoA | zur | BL01025 | BL03703 | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcriptional regulator; Belongs to the Fur family. | 0.595 |
| rpoB | gltA | BL02798 | BL01971 | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Glutamate synthase (large subunit). | 0.427 |
| rpoB | rpoA | BL02798 | BL01025 | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoC | BL02798 | BL02626 | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | sigA | BL02798 | BL03682 | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase major sigma-43 factor (sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.987 |
| rpoB | zur | BL02798 | BL03703 | RNA polymerase (beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcriptional regulator; Belongs to the Fur family. | 0.486 |
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