STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03758Hypothetical protein. (249 aa)    
Predicted Functional Partners:
BL03759
Putative transcriptional regulator.
 
    0.873
BL01922
Hypothetical protein.
  
     0.672
BL03757
Putative DNA binding protein.
       0.548
ykkA
Conserved hypothetical protein YkkA.
       0.535
pel
Pectate lyase family 1,Pel.
       0.503
ybbJ
GCN5-related N-acetyltransferase.
  
     0.462
BL00807
Hypothetical protein.
  
     0.436
yraH
Glyoxalase I.
  
     0.413
BL00977
Phage related major head protein.
  
     0.404
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.