STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lplBTransmembrane lipoprotein. (317 aa)    
Predicted Functional Partners:
lplC
Transmembrane lipoprotein.
 
 
 0.993
lplA
Lipoprotein.
 
 
 0.983
BL03024
Putative extracellular solute-binding protein, family 1.
 
 
 0.959
ytcP
Putative multiple sugar transport system permease protein YtcP.
 
  
 0.838
ytcQ
Putative multiple sugar transport system substrate-binding protein YtcQ.
 
  
 0.801
yesQ
Probable transporter permease protein YesQ.
 
  
 0.793
araQ
Integral membrane protein.
 
  
 0.734
yesO
Putative transport system substrate-binding protein YesO.
 
  
 0.727
BL01931
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.718
amyC
Maltose transport protein AmyC.
 
  
 0.713
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.