Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yesSProbable transcriptional regulator. (760 aa)    
Predicted Functional Partners:
yesU
YesU.
 
     0.918
yesT
Putative carbohydrate esterase, Family 12, YesT.
 
     0.771
yesV
Conserved membrane protein YesV.
 
     0.767
cheA
Two-component sensor histidine kinase CheA.
  
 
 0.740
yesO
Putative transport system substrate-binding protein YesO.
 
     0.711
yesM
Two-component sensor histidine kinase YesM.
 
  
 0.695
lplA
Lipoprotein.
  
     0.689
yesR
Conserved protein YesR.
 
     0.675
xkdO
Hypothetical phage related protein.
  
     0.651
yesP
Putatice transporter permease protein YesP.
 
     0.634
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.