STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yesLConserved membrane protein YesL. (214 aa)    
Predicted Functional Partners:
yesM
Two-component sensor histidine kinase YesM.
 
    0.863
yesN
Two-component response regulator YesN.
 
    0.797
yesO
Putative transport system substrate-binding protein YesO.
 
    0.605
ytcQ
Putative multiple sugar transport system substrate-binding protein YtcQ.
 
    0.544
BL01744
Putative Histidine kinase.
 
    0.518
BL03024
Putative extracellular solute-binding protein, family 1.
 
    0.515
araN
Sugar-binding protein.
 
    0.503
ggt
Gamma-glutamyltranspeptidase.
       0.494
ylqG
Conserved hypothetical protein.
  
     0.492
lplA
Lipoprotein.
 
    0.481
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.