STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL03808Hypothetical phage related protein. (319 aa)    
Predicted Functional Partners:
BL03805
Phage related protein.
  
    0.745
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.726
BL03807
Holin.
  
    0.683
xkdU
Hypothetical phage related protein.
  
    0.630
xkdT
Hypothetical phage related protein.
  
    0.630
xkdS
Hypothetical phage related protein.
  
    0.630
BL03809
Hypothetical phage related protein.
      
0.628
xkdQ
Hypothetical phage related protein.
  
    0.617
BL03810
Hypothetical phage related protein.
       0.612
xkdR
Hypothetical phage related protein.
  
    0.570
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.