STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
licRTranscriptional regulator. (649 aa)    
Predicted Functional Partners:
manP
Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component.
 
 
 0.954
fruA
Phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
 
 
 0.948
BL01775
Putative sugar phosphotransferase.
 
 
 0.922
BL01776
Putative sugar phosphotransferase system protein.
 
 
 0.918
mtlD
Mannitol-1-phosphate dehydrogenase.
 
 
 0.906
licB
Phosphotransferase system (PTS) lichenan-specific enzyme IIB component.
 
  
 0.887
licC
Phosphotransferase system (PTS) lichenan-specific enzyme IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
  
 0.877
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component.
 
  
 0.872
uxaB
Tagaturonate reductase (altronate oxidoreductase).
  
 
 0.868
BL00298
PTS phosophotransferase.
  
 0.817
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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