STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03900Binding-protein-dependent transport systems inner membrane component. (368 aa)    
Predicted Functional Partners:
yfiK
Two-component response regulator.
  0.978
desR
Two-component response regulator responsible for cold induction of the des gene.
 0.974
yvfU
CheY-like.
 
 0.941
ydfI
Putative transcriptional regulator YdfI.
  0.915
comA
Two-component response regulator.
 
  0.902
BL02058
Two-component response regulator.
  0.901
BL03875
Two-component response regulator.
 
  0.900
yhcZ
Putative transcriptional regulator YhcZ.
  0.899
degU
Two-component response regulator.
  0.897
liaR
Two-component response regulator LiaR.
  0.891
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.