STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BL03909Putative oxidoreductase. (283 aa)    
Predicted Functional Partners:
BL03907
Putative 4-oxalocrotonate decarboxylase.
 
  
 0.907
BL03908
4-oxalocrotonate tautomerase.
 
   
 0.837
BL03911
4-hydroxybenzoate 3-monooxygenase.
 
  
 0.773
BL03957
Putative decarboxylase.
 
   
 0.697
BL03906
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.656
BL03910
Putative transporter.
  
    0.652
BL03958
Transcriptional regulator (IclR family).
       0.485
ywfL
Conserved protein YwfL; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.
       0.435
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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