Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL04025 | dhbB | BL04025 | BL04023 | Conserved hypothetical protein. | Isochorismatase. | 0.999 |
BL04025 | dhbF | BL04025 | BL04024 | Conserved hypothetical protein. | DhbF. | 0.999 |
BL04025 | dltA | BL04025 | BL03934 | Conserved hypothetical protein. | D-alanyl-D-alanine carrier protein ligase (Dcl); Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to t [...] | 0.917 |
BL04025 | dltC | BL04025 | BL03932 | Conserved hypothetical protein. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.735 |
BL04025 | lchAA | BL04025 | BL01726 | Conserved hypothetical protein. | Lichenysin synthetase A. | 0.999 |
BL04025 | lchAB | BL04025 | BL01727 | Conserved hypothetical protein. | Lichenysin synthetase B. | 0.999 |
dhbB | BL04025 | BL04023 | BL04025 | Isochorismatase. | Conserved hypothetical protein. | 0.999 |
dhbB | dhbF | BL04023 | BL04024 | Isochorismatase. | DhbF. | 0.999 |
dhbB | dltA | BL04023 | BL03934 | Isochorismatase. | D-alanyl-D-alanine carrier protein ligase (Dcl); Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to t [...] | 0.969 |
dhbB | dltC | BL04023 | BL03932 | Isochorismatase. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.869 |
dhbB | lchAA | BL04023 | BL01726 | Isochorismatase. | Lichenysin synthetase A. | 0.999 |
dhbB | lchAB | BL04023 | BL01727 | Isochorismatase. | Lichenysin synthetase B. | 0.997 |
dhbF | BL04025 | BL04024 | BL04025 | DhbF. | Conserved hypothetical protein. | 0.999 |
dhbF | dhbB | BL04024 | BL04023 | DhbF. | Isochorismatase. | 0.999 |
dhbF | dltA | BL04024 | BL03934 | DhbF. | D-alanyl-D-alanine carrier protein ligase (Dcl); Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to t [...] | 0.983 |
dhbF | dltB | BL04024 | BL03933 | DhbF. | DltB; Could be involved in the transport of activated D-alanine through the membrane. | 0.996 |
dhbF | dltC | BL04024 | BL03932 | DhbF. | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.980 |
dhbF | dltD | BL04024 | BL03931 | DhbF. | Precusor DltD. | 0.990 |
dhbF | fabD | BL04024 | BL02314 | DhbF. | Malonyl CoA-acyl carrier protein transacylase. | 0.993 |
dhbF | hemL | BL04024 | BL00628 | DhbF. | Glutamate-1-semialdehyde 2,1-aminotransferase. | 0.944 |
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